sequencer.c File Reference

#include "tm.h"
#include <assert.h>
#include <stdlib.h>
#include <string.h>
#include "hash.h"
#include "hashtable.h"
#include "segments.h"
#include "sequencer.h"
#include "table.h"
#include "thread.h"
#include "utility.h"
#include "vector.h"
#include "types.h"

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Classes
struct	endInfoEntry
struct	constructEntry

Functions
static ulong_t	hashString (char *str)
static ulong_t	hashSegment (const void *keyPtr)
static long	compareSegment (const pair_t *a, const pair_t *b)
static long	TMcompareSegment (TM_ARGDECL const pair_t *a, const pair_t *b)
sequencer_t *	sequencer_alloc (long geneLength, long segmentLength, segments_t *segmentsPtr)
void	sequencer_run (void *argPtr)
void	sequencer_free (sequencer_t *sequencerPtr)

Variables
comparator_t sequencer_comparesegment &	compareSegment

Function Documentation

static long compareSegment ( const pair_t *  a, const pair_t *  b  )

static

static ulong_t hashSegment ( const void *  keyPtr )

static

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static ulong_t hashString ( char *  str )

static

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sequencer_t* sequencer_alloc	(	long	geneLength,
		long	segmentLength,
		segments_t *	segmentsPtr
	)

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void sequencer_free

(

sequencer_t *

sequencerPtr

)

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void sequencer_run

(

void *

argPtr

)

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static long TMcompareSegment ( TM_ARGDECL const pair_t *  a, const pair_t *  b  )

static

Variable Documentation

comparator_t sequencer_comparesegment& compareSegment